RYDE-WORK/lnp_ml
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lnp_ml/app/PARAM.md
RYDE-WORK 982e98cced Add LNP fomular optimization
2026-01-25 23:54:20 +08:00

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Possible Values

comp token([B, 5], the sum of the latter four ratio is always 1)

Cationic_Lipid_to_mRNA_weight_ratio(float, Min: 0.05, Max: 0.3, Step Size: 0.01) Cationic_Lipid_Mol_Ratio(float, Min: 0.05, Max: 0.8, Step Size: 0.01) Phospholipid_Mol_Ratio(float, Min: 0, Max: 0.8, Step Size: 0.01) Cholesterol_Mol_Ratio(float, Min: 0, Max: 0.8, Step Size: 0.01) PEG_Lipid_Mol_Ratio(float, Min: 0, Max: 0.05, Step Size: 0.01)

phys token([B, 12])

Purity_Pure(one-hot for Purity, always Pure) Purity_Crude(one-hot for Purity, always Pure) Mix_type_Microfluidic(one-hot for Mix_type, always Microfluidic) Mix_type_Microfluidic(one-hot for Mix_type, always Microfluidic) Cargo_type_mRNA(one-hot for Cargo_type, always mRNA) Cargo_type_pDNA(one-hot for Cargo_type, always mRNA) Cargo_type_siRNA(one-hot for Cargo_type, always mRNA) Target_or_delivered_gene_FFL(one-hot for Target_or_delivered_gene, always FFL) Target_or_delivered_gene_Peptide_barcode(one-hot for Target_or_delivered_gene, always FFL) Target_or_delivered_gene_hEPO(one-hot for Target_or_delivered_gene, always FFL) Target_or_delivered_gene_FVII(one-hot for Target_or_delivered_gene, always FFL) Target_or_delivered_gene_GFP(one-hot for Target_or_delivered_gene, always FFL)

help token([B, 4])

Helper_lipid_ID_DOPE(one-hot for Helper_lipid_ID, one of {DOPE, DSPC, DOTAP}) Helper_lipid_ID_DOTAP(one-hot for Helper_lipid_ID, one of {DOPE, DSPC, DOTAP}) Helper_lipid_ID_DSPC(one-hot for Helper_lipid_ID, one of {DOPE, DSPC, DOTAP}) Helper_lipid_ID_MDOA(one-hot for Helper_lipid_ID, one of {DOPE, DSPC, DOTAP})

exp token([B, 32])

Model_type_A549(one-hot for Model_type, always Mouse) Model_type_BDMC(one-hot for Model_type, always Mouse) Model_type_BMDM(one-hot for Model_type, always Mouse) Model_type_HBEC_ALI(one-hot for Model_type, always Mouse) Model_type_HEK293T(one-hot for Model_type, always Mouse) Model_type_HeLa(one-hot for Model_type, always Mouse) Model_type_IGROV1(one-hot for Model_type, always Mouse) Model_type_Mouse(one-hot for Model_type, always Mouse) Model_type_RAW264p7(one-hot for Model_type, always Mouse) Delivery_target_dendritic_cell(one-hot for Delivery_target, always body) Delivery_target_generic_cell(one-hot for Delivery_target, always body) Delivery_target_liver(one-hot for Delivery_target, always body) Delivery_target_lung(one-hot for Delivery_target, always body) Delivery_target_lung_epithelium(one-hot for Delivery_target, always body) Delivery_target_macrophage(one-hot for Delivery_target, always body) Delivery_target_muscle(one-hot for Delivery_target, always body) Delivery_target_spleen(one-hot for Delivery_target, always body) Delivery_target_body(one-hot for Delivery_target, always body) Route_of_administration_in_vitro(one-hot for Route_of_administration, one of {Intravenous, Intramuscular}) Route_of_administration_intravenous(one-hot for Route_of_administration, one of {Intravenous, Intramuscular}) Route_of_administration_intramuscular(one-hot for Route_of_administration, one of {Intravenous, Intramuscular}) Route_of_administration_intratracheal(one-hot for Route_of_administration, one of {Intravenous, Intramuscular}) Sample_organization_type_individual(one-hot for Sample_organization_type, always Individual) Sample_organization_type_barcoded(one-hot for Sample_organization_type, always Individual) Value_name_log_luminescence(one-hot for Value_name, always luminescence) Value_name_luminescence(one-hot for Value_name, always luminescence) Value_name_FFL_silencing(one-hot for Value_name, always luminescence) Value_name_Peptide_abundance(one-hot for Value_name, always luminescence) Value_name_hEPO(one-hot for Value_name, always luminescence) Value_name_FVII_silencing(one-hot for Value_name, always luminescence) Value_name_GFP_delivery(one-hot for Value_name, always luminescence) Value_name_Discretized_luminescence(one-hot for Value_name, always luminescence)